Bone Marrow Microenvironment-dependent Induction of mTORC1 causes therapy resistance in Multiple Myeloma
Multiple Myeloma (MM) is a bone marrow neoplasm characterized by clonal expansion of terminally differentiated B cells. The bone marrow (BM) niche promotes drug resistance and disease progression through soluble factors and cell-cell contact. The PI3K/AKT signaling pathway is activated in MM cells via the Insulin-like Growth Factor-1 receptor (IGF1R). We previously showed that negative regulation of Forkhead box O (FOXO) transcription factors is a key downstream function of AKT in MM, as FOXO activation induces cell death and metabolic shutdown in MM cells. We observed FOXO-dependent upregulation of IGF1R after AKT inhibition, suggesting an adaptive signaling pathway enabling MM cells to bypass AKT blockade. Combined AKT and IGF1R inhibition robustly induced cell death, but this was not replicated in a humanized mouse model. Further experiments revealed that microenvironmental factors induce parallel activation of mechanistic Target of Rapamycin Complex 1 (mTORC1). The mTORC1 inhibitor Rapamycin overcame microenvironment-induced resistance to AKT and IGF1R inhibitors. Additionally, mTORC1 inhibition reversed BM stromal cell (BMSC)-mediated resistance to the proteasome inhibitor Carfilzomib, indicating a generalized resistance mechanism in MM therapeutics. This project aims to comprehensively characterize pathways involved in cell-extrinsic resistance mechanisms.
To delineate factors driving mTORC1-dependent drug resistance, we performed whole-genome CRISPR screens with MM cells cultured in BMSC-conditioned medium. Parallel FACS-based CRISPR screens utilized the Tor-Signal Indicator (TOSI) system, a PDCD4-degron fluorescent probe serving as an mTOR activity sensor, to identify proteins involved in microenvironment-mediated mTORC1 activation. Candidate genes were validated via neutralizing antibodies, CRISPR gene-editing, and pharmacological inhibition.
Coculture with HS-5 stromal cells, but not HS-27a cells, abrogated cytotoxicity of AKT/IGF1R inhibitors. Transcriptomic comparison of these BMSC lines identified factors including IL-6, FGF2, and GM-CSF. IL6 and HS5-conditioned medium strongly induced STAT3 phosphorylation. IL-6 supplementation protected MM cells from inhibition, but IL-6 neutralizing antibodies only partially reversed resistance. Constitutively active STAT3 expression failed to confer protection, suggesting a JAK-dependent, STAT3-independent resistance mechanism.
We have shown that HS-5 stromal cells promote resistance of MM cells to AKT/IGF1R inhibition via mTORC1 activation. Both up- and downstream inhibition of the IL-6/JAK/STAT pathway only partial restored sensitivity to AKT/IGF1R inhibition. This suggests the involvement of other growth factors or a combinatorial effect. Our data furthermore suggests a JAK-dependent, STAT3-independent protective mechanism of action, pointing towards alternative downstream effectors. In addition, mTORC1 inhibition overcomes resistance to proteasome inhibitors, supporting strategies for combination therapies targeting both BMSC-mediated and tumor-intrinsic pathways to improve MM treatment outcomes. Whole genome CRISPR screens identifying key genes in mTORC1 activation offer novel therapeutic targets. Future work will validate candidate mediators and clarify their roles in microenvironment-driven resistance.
